Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848555.1_cds_XP_016510443.1_23279
CDS Infomation

[gene=LOC107827761] [db_xref=GeneID:107827761] [protein=EH domain-containing protein 1-like] [protein_id=XP_016510443.1] [location=join(20944..21028,21129..21208,23540..23608,23709..23766,23948..24003,24080..24119,24227..24291,24764..24877,25038..25140,25228..25277,25752..25880,25989..26240,26330..26394,26564..26723,26824..26967,27128..27313)] [gbkey=CDS]
Sequence

ATGGAGTTTGATACTTCTCCGATTAGTCGCTGCTCCAAAGAGCATGAAAAAATCTATCAG
CAGTGGTTTAGTTTAGCCGATTCAGATGGAGATGGGCGTCTCACTGGAGGCGATGCCATT
AAGTTCTTTGCCTTGTCCAATTTGTCACGCCAGGATCTCAAGCAGGTGTGGGCGATTGCA
GATTCCAAACGGCAAGGCTTTCTTGGTTTTAGAGAGTTTATTACTTCAATGCAGTTGGTC
TCTTTGGCTCAAGCTGGCCATCCAGTAACCAGTGATCTCTTAAATGCTGAAGTTAACTTT
GAAAATTTGCAACCCCCTACCTTAGAAGGTCTTGATTTACTTCAAGCTAAGAAAAAGCGC
GCGCCTAAAAGTGAACCTGAACAGAATGGCAATCCTACAGTGCAATCTTCCGTTACAGCT
AATTGGTTTTCATCATCAACATCTGTAAAGAAGGTCTCTTTAACCTCCGTCACATCCATA
ATCGATGGACTGAAGAAGTTATACATCCAAAAACTAAAGCCTCTGGAAGTCGCATATCGC
TTTAATGATTTCGTCTCTCCATTCTTGACAAATAGTGATTTTGATGCCAAACCAATGGTG
ATGCTTTTGGGTCAATACTCAACCGGTAAAACAACATTCATTAAGCATTTACTTAGAACT
AGCTATCCAGGTGCTCATATCGGGCCAGAGCCTACCACCGACAGATTTGTGGTTGTCATG
AATGGACCTGATGAAAGGAGTATTCCGGGGAACACAATTGCTGTTCAGGCAGATATGCCA
TTTAGCGGTCTGACAACTTTTGGAACTGCTTTTTTGTCAAAATTTGAGTGTTCTCAAATG
CCTCATCCTCTATTGGAGCACATCACGTTTGTGGATACTCCTGGAGTTCTATCTGGCGAA
AAGCAACGAACACAAAGGAGCTATGATTTTACCGGTGTGACATCTTGGTTTGCTTCTAAG
TGTGATCTCATTCTTCTTTTGTTTGATCCCCACAAACTTGATATAAGTGATGAATTCAAA
CGTGTGATTGCGTCTCTTCGAGGCCATGATGATAAGATACGAGTGGTTTTGAACAAGGCT
GACCAAGTTGATACTCAACAACTTATGAGGGTTTATGGAGCATTGATGTGGTCACTAGGG
AAGGTNATACTCAACCTATCGGACGCTTCCACAAAAATGTGGTGTTTTGGCTTCTACAGA
TCATTCAATGACAAACCAATAAATGAGGCTGCTACAGGGCCAGTTGGAAAAGAACTTTTT
GAAAAGGAGCAAGATGATCTTCTTACAGATTTGAAAAACATACCAAAGAAGGCTTGTGAT
CGTCGTATAAATGAGTTTGTAAAACGTGCTAGAGCTGCCAAGATACATTCTTATATTATC
AGTCACCTGAAAAAGGAGATGCCTGCAATGATAGGCAAAGCCAAGACACAGCAAAAACTA
ATTGATAACTTGGAAGATCAATTTGTAAAGGTTCAAAAGGAACACCATCTGCCACCTGGG
GATTTTCCTAATGTCGAACACTTCAGGGAAGTTCTGAGTGGTTATAACATTGATAAGTTT
GAGAAGTTGAAGCCCAAATTGATACAATCTGTCGATGACATGCTTGGTTATGACATCCCT
GAACTTCTCAAGAATTTCAGAAATCCTTATGATTGA

Peptide Sequence

PEP ID

XP_016510443.1
PEP Infomation

PREDICTED: EH domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MEFDTSPISRCSKEHEKIYQQWFSLADSDGDGRLTGGDAIKFFALSNLSRQDLKQVWAIA
DSKRQGFLGFREFITSMQLVSLAQAGHPVTSDLLNAEVNFENLQPPTLEGLDLLQAKKKR
APKSEPEQNGNPTVQSSVTANWFSSSTSVKKVSLTSVTSIIDGLKKLYIQKLKPLEVAYR
FNDFVSPFLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVM
NGPDERSIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGE
KQRTQRSYDFTGVTSWFASKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKA
DQVDTQQLMRVYGALMWSLGKVILNLSDASTKMWCFGFYRSFNDKPINEAATGPVGKELF
EKEQDDLLTDLKNIPKKACDRRINEFVKRARAAKIHSYIISHLKKEMPAMIGKAKTQQKL
IDNLEDQFVKVQKEHHLPPGDFPNVEHFREVLSGYNIDKFEKLKPKLIQSVDDMLGYDIP
ELLKNFRNPYD

Transcript Sequence

Gene sequence data has not been registered.